Transcript: lnc-AAGAB-1:4

Basic information

LNCipedia transcript ID: lnc-AAGAB-1:4 
LNCipedia gene ID: lnc-AAGAB-1
RefSeq ID: NR_135686
Location (hg38): chr15:66984207-67064182
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1830 bp
Exons: 6
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135686.1
Alternative gene names: LOC102723493


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -89.5981 non-coding 
CPAT coding probability 12.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AAGAB-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-AAGAB-1:4
5.1 lnc-AAGAB-1:4
5.2 lnc-AAGAB-1:4