Transcript: lnc-AAK1-1:3

Basic information

LNCipedia transcript ID: lnc-AAK1-1:3 
LNCipedia gene ID: lnc-AAK1-1
Location (hg38): chr2:69457997-69466503
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 8507 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000606389.2
Alternative gene names: ENSG00000188971.4; RP11-427H3.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2100.27 coding 
CPAT coding probability 99.79% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AAK1-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC114772.1-1:2
4.0 lnc-AC114772.1-1:2
4.1 lnc-AC114772.1-1:2
5.0 lnc-AC114772.1-1:2
5.1 lnc-GKN2-8:2
5.2 lnc-AAK1-1:3