Transcript: lnc-AATK-10:2

Basic information

LNCipedia transcript ID: lnc-AATK-10:2 
LNCipedia gene ID: lnc-AATK-10
Location (hg38): chr17:80801640-80805620
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3192 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000501711
Alternative gene names: ENSG00000247501


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.6067 non-coding 
CPAT coding probability 16.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AATK-10:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC127496.3-2:1
3.1 lnc-AC127496.3-8:2
4.0 lnc-AC127496.3-8:2
4.1 lnc-AC127496.3-8:2
5.0 lnc-AC127496.3-8:2
5.1 lnc-SGSH-21:2
5.2 lnc-AATK-10:2