Transcript: lnc-ABCA3-2:1

Basic information

LNCipedia transcript ID: lnc-ABCA3-2:1 
LNCipedia gene ID: lnc-ABCA3-2
Location (hg38): chr16:2263897-2264876
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 739 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT052088
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 340.5386 coding 
CPAT coding probability 61.91% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ABCA3-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ECI1-2:2
4.0 lnc-ABCA3-2:1
4.1 lnc-ABCA3-2:1
5.0 lnc-ABCA3-2:1
5.1 lnc-PKMYT1-48:1
5.2 lnc-ABCA3-2:1