Transcript: lnc-ABCA5-111:1

Basic information

LNCipedia transcript ID: lnc-ABCA5-111:1 
LNCipedia gene ID: lnc-ABCA5-111
RefSeq ID: NR_130736
Location (hg38): chr17:69232975-69235012
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2038 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_130736.1
Alternative gene names: PRO1804


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.4022 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCA5-111:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CYB561-111:1
5.1 lnc-CYB561-111:1
5.2 lnc-ABCA5-111:1