Transcript: lnc-ABCC10-2:1

Basic information

LNCipedia transcript ID: lnc-ABCC10-2:1 
LNCipedia gene ID: lnc-ABCC10-2
Location (hg38): chr6:43455186-43457517
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2332 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1162:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.3011 non-coding 
CPAT coding probability 26.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCC10-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ABCC10-2:1
4.1 lnc-ABCC10-2:1
5.0 lnc-ABCC10-2:1
5.1 lnc-TREML4-58:1
5.2 lnc-ABCC10-2:1