Transcript: lnc-ABCD3-2:13

Basic information

LNCipedia transcript ID: lnc-ABCD3-2:13 
LNCipedia gene ID: lnc-ABCD3-2
Location (hg38): chr1:94247870-94250009
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 862 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231363.1|HBMT00000022190.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -109.8629 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCD3-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ABCD3-2:13
5.0 lnc-ABCD3-2:13
5.1 lnc-BTBD8-34:5
5.2 lnc-ABCD3-2:13