Transcript: lnc-ABCG2-3:5

Basic information

LNCipedia transcript ID: lnc-ABCG2-3:5 
LNCipedia gene ID: lnc-ABCG2-3
Location (hg38): chr4:87996276-88007459
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 5819 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000073068.1|MICT00000267873.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.9236 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABCG2-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ABCG2-3:5
5.0 lnc-ABCG2-3:5
5.1 lnc-PPM1K-4:4
5.2 lnc-ABCG2-3:5