Transcript: lnc-ABHD2-1:4

Basic information

LNCipedia transcript ID: lnc-ABHD2-1:4 
LNCipedia gene ID: lnc-ABHD2-1
Location (hg38): chr15:89041137-89079533
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 451 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024002; NONHSAT048225
Alternative gene names: XLOC_011344; linc-ABHD2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.1099 non-coding 
CPAT coding probability 6.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABHD2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ABHD2-1:4
3.1 lnc-ABHD2-1:4
4.0 lnc-ABHD2-1:4
4.1 lnc-ABHD2-1:4
5.0 lnc-ABHD2-1:4
5.1 lnc-ACAN-7:12
5.2 lnc-ABHD2-1:4