Transcript: lnc-ABHD4-11:1

Basic information

LNCipedia transcript ID: lnc-ABHD4-11:1 
LNCipedia gene ID: lnc-ABHD4-11
Ensembl Gene ID: ENSG00000259003
Ensembl Transcript ID: ENST00000557595
Location (hg38): chr14:22556640-22559037
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 781 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000557595.1
Alternative gene names: ENSG00000259003.1; AE000662.92; AC243965.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -208.1917 non-coding 
CPAT coding probability 48.13% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ABHD4-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AE000662.92.1-11:1
4.1 lnc-AE000662.92.1-11:1
5.0 lnc-AE000662.92.1-11:1
5.1 lnc-RNF212B-13:1
5.2 lnc-ABHD4-11:1