Transcript: lnc-ABHD4-4:2

Basic information

LNCipedia transcript ID: lnc-ABHD4-4:2 
LNCipedia gene ID: lnc-ABHD4-4
Ensembl Gene ID: ENSG00000259042
Ensembl Transcript ID: ENST00000555460
Location (hg38): chr14:22417836-22418657
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 457 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000555460.2
Alternative gene names: ENSG00000259042.2; AE000661.50; AC244502.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -366.3657 non-coding 
CPAT coding probability 2.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABHD4-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AE000662.92.1-2:2
4.1 lnc-AE000662.92.1-2:2
5.0 lnc-AE000662.92.1-2:2
5.1 lnc-RNF212B-14:2
5.2 lnc-ABHD4-4:2