Transcript: lnc-ABI1-3:1

Basic information

LNCipedia transcript ID: lnc-ABI1-3:1 
LNCipedia gene ID: lnc-ABI1-3
Location (hg38): chr10:26577576-26579380
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 597 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018454; NONHSAT011830
Alternative gene names: XLOC_008752; linc-ENKUR-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.1894 non-coding 
CPAT coding probability 1.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABI1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ABI1-2:1
3.1 lnc-ABI1-3:1
4.0 lnc-ABI1-3:1
4.1 lnc-ABI1-3:1
5.0 lnc-ABI1-3:1
5.1 lnc-MPP7-35:1
5.2 lnc-ABI1-3:1