Transcript: lnc-ABI1-3:5

Basic information

LNCipedia transcript ID: lnc-ABI1-3:5 
LNCipedia gene ID: lnc-ABI1-3
RefSeq ID: NR_134472
Location (hg38): chr10:26577686-26579307
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 414 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134472.1
Alternative gene names: LOC101929117


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.1894 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABI1-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MPP7-35:4
5.1 lnc-MPP7-35:4
5.2 lnc-ABI1-3:5