Transcript: lnc-ABI3-2:4

Basic information

LNCipedia transcript ID: lnc-ABI3-2:4 
LNCipedia gene ID: lnc-ABI3-2
Location (hg38): chr17:49248228-49253259
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 910 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00025425
Alternative gene names: XLOC_012230; linc-NGFR-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.5421 non-coding 
CPAT coding probability 41.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ABI3-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ABI3-2:4
3.1 lnc-ABI3-2:4
4.0 lnc-ABI3-2:4
4.1 lnc-ABI3-2:4
5.0 lnc-ABI3-2:4
5.1 lnc-ACSF2-38:4
5.2 lnc-ABI3-2:4