Transcript: lnc-ABI3-5:1

Basic information

LNCipedia transcript ID: lnc-ABI3-5:1 
LNCipedia gene ID: lnc-ABI3-5
Location (hg38): chr17:49274076-49274285
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 210 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT054518; FPKM1_group_12886_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.7518 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABI3-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABI3-5:1
4.0 lnc-ABI3-5:1
4.1 lnc-ABI3-5:1
5.0 lnc-ABI3-5:1
5.1 lnc-ACSF2-36:1
5.2 lnc-ABI3-5:1