Transcript: lnc-ABL2-2:1

Basic information

LNCipedia transcript ID: lnc-ABL2-2:1 
LNCipedia gene ID: lnc-ABL2-2
Location (hg38): chr1:179035309-179035652
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 344 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT007841
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.139 non-coding 
CPAT coding probability 22.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABL2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABL2-2:1
4.0 lnc-ABL2-2:1
4.1 lnc-ABL2-2:1
5.0 lnc-ABL2-2:1
5.1 lnc-SH2D1B-170:1
5.2 lnc-ABL2-2:1