Transcript: lnc-ABL2-3:1

Basic information

LNCipedia transcript ID: lnc-ABL2-3:1 
LNCipedia gene ID: lnc-ABL2-3
Location (hg38): chr1:179014504-179019785
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 291 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT007840; FPKM1_group_1759_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.1493 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABL2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABL2-3:1
4.0 lnc-ABL2-3:1
4.1 lnc-ABL2-3:1
5.0 lnc-ABL2-3:1
5.1 lnc-SH2D1B-169:1
5.2 lnc-ABL2-3:1