Transcript: lnc-ABLIM1-1:1

Basic information

LNCipedia transcript ID: lnc-ABLIM1-1:1 
LNCipedia gene ID: lnc-ABLIM1-1
Location (hg38): chr10:114819929-114821440
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 211 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019032; NONHSAT016466
Alternative gene names: XLOC_008957; linc-ABLIM1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -228.3294 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABLIM1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ABLIM1-1:1
3.1 lnc-ABLIM1-1:1
4.0 lnc-ABLIM1-1:1
4.1 lnc-ABLIM1-1:1
5.0 lnc-ABLIM1-1:1
5.1 lnc-BBIP1-47:2
5.2 lnc-ABLIM1-1:1