Transcript: lnc-ABT1-3:11

Basic information

LNCipedia transcript ID: lnc-ABT1-3:11 
LNCipedia gene ID: lnc-ABT1-3
Location (hg38): chr6:26673259-26687835
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5244 bp
Exons: 7
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_27383_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.4402 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABT1-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ABT1-3:11
4.0 lnc-ABT1-3:11
4.1 lnc-ABT1-3:11
5.0 lnc-ABT1-3:11
5.1 lnc-CARMIL1-46:2
5.2 lnc-ABT1-3:11