Transcript: lnc-ABT1-3:13

Basic information

LNCipedia transcript ID: lnc-ABT1-3:13 
LNCipedia gene ID: lnc-ABT1-3
Location (hg38): chr6:26671598-26688239
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7226 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1787:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.2117 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ABT1-3:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ABT1-3:13
4.1 lnc-ABT1-3:13
5.0 lnc-ABT1-3:13
5.1 lnc-CARMIL1-46:1
5.2 lnc-ABT1-3:13