Transcript: lnc-ACOX3-1:1

Basic information

LNCipedia transcript ID: lnc-ACOX3-1:1 
LNCipedia gene ID: lnc-ACOX3-1
Location (hg38): chr4:8355311-8357376
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2066 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000505448; ENST00000505448.1; RP11-774O3.3-001; OTTHUMT00000359029.3
Alternative gene names: ENSG00000251615; RP11-774O3.3; ENSG00000251615.1; OTTHUMG00000160053.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8199 non-coding 
CPAT coding probability 99.22% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ACOX3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACOX3-1:1
3.1 lnc-ACOX3-1:1
4.0 lnc-ACOX3-1:1
4.1 lnc-ACOX3-1:1
5.0 lnc-ACOX3-1:1
5.1 lnc-AFAP1-5:3
5.2 lnc-ACOX3-1:1