Transcript: lnc-ACP1-3:3

Basic information

LNCipedia transcript ID: lnc-ACP1-3:3 
LNCipedia gene ID: lnc-ACP1-3
Location (hg38): chr2:198354-210331
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1334 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004654; NONHSAT068487
Alternative gene names: XLOC_001300; linc-ACP1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.7203 non-coding 
CPAT coding probability 12.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACP1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACP1-2:3
3.1 lnc-ACP1-3:3
4.0 lnc-ACP1-3:3
4.1 lnc-ACP1-3:3
5.0 lnc-ACP1-3:3
5.1 lnc-SNX17-308:3
5.2 lnc-ACP1-3:3