Transcript: lnc-ACP1-3:4

Basic information

LNCipedia transcript ID: lnc-ACP1-3:4 
LNCipedia gene ID: lnc-ACP1-3
Location (hg38): chr2:199376-211224
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2333 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003527; NONHSAT068488
Alternative gene names: XLOC_001300; linc-ACP1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.7203 non-coding 
CPAT coding probability 11.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACP1-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACP1-2:4
3.1 lnc-ACP1-3:4
4.0 lnc-ACP1-3:4
4.1 lnc-ACP1-3:4
5.0 lnc-ACP1-3:4
5.1 lnc-SNX17-308:4
5.2 lnc-ACP1-3:4