Transcript: lnc-ACP1-9:12

Basic information

LNCipedia transcript ID: lnc-ACP1-9:12 
LNCipedia gene ID: lnc-ACP1-9
RefSeq ID: NR_136169
Location (hg38): chr2:558201-562093
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2201 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136169.1
Alternative gene names: LOC105373352


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.3994 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACP1-9:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SNX17-294:10
5.1 lnc-SNX17-294:10
5.2 lnc-ACP1-9:12