Transcript: lnc-ACP1-9:2

Basic information

LNCipedia transcript ID: lnc-ACP1-9:2 
LNCipedia gene ID: lnc-ACP1-9
Location (hg38): chr2:558187-564135
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 853 bp
Exons: 6
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004656; NONHSAT068565
Alternative gene names: XLOC_001308; linc-SNTG2-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.3143 non-coding 
CPAT coding probability 5.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACP1-9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACP1-8:2
3.1 lnc-ACP1-9:2
4.0 lnc-ACP1-9:2
4.1 lnc-ACP1-9:2
5.0 lnc-ACP1-9:2
5.1 lnc-SNX17-294:2
5.2 lnc-ACP1-9:2