Transcript: lnc-ACP4-1:2

Basic information

LNCipedia transcript ID: lnc-ACP4-1:2 
LNCipedia gene ID: lnc-ACP4-1
Location (hg38): chr19:50787819-50789040
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1222 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT067359; FPKM1_group_14982_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.5058 non-coding 
CPAT coding probability 3.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACP4-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACPT-1:1
4.0 lnc-ACPT-1:1
4.1 lnc-ACPT-1:1
5.0 lnc-ACPT-1:1
5.1 lnc-ACP4-1:1
5.2 lnc-ACP4-1:2