Transcript: lnc-ACSBG2-2:7

Basic information

LNCipedia transcript ID: lnc-ACSBG2-2:7 
LNCipedia gene ID: lnc-ACSBG2-2
Ensembl Gene ID: ENSG00000267262
Ensembl Transcript ID: ENST00000587759
Location (hg38): chr19:6067953-6077119
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 567 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT060737; ENST00000587759.1
Alternative gene names: ENSG00000267262.1; CTC-232P5.3; AC011444.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.2494 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACSBG2-2:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACSBG2-4:1
4.0 lnc-ACSBG2-4:1
4.1 lnc-ACSBG2-2:7
5.0 lnc-ACSBG2-2:7
5.1 lnc-RPL36-18:6
5.2 lnc-ACSBG2-2:7