Transcript: lnc-ACTL7B-11:5

Basic information

LNCipedia transcript ID: lnc-ACTL7B-11:5 
LNCipedia gene ID: lnc-ACTL7B-11
Location (hg38): chr9:108444499-108444746
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 248 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000109375.1|FTMT23400008055.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACTL7B-11:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AL162389.1-11:3
5.0 lnc-AL162389.1-11:3
5.1 lnc-SLC46A2-74:5
5.2 lnc-ACTL7B-11:5