Transcript: lnc-ACTL8-1:2

Basic information

LNCipedia transcript ID: lnc-ACTL8-1:2 
LNCipedia gene ID: lnc-ACTL8-1
Location (hg38): chr1:17717755-17722346
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 846 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000852; NONHSAT001253
Alternative gene names: XLOC_000070; linc-ACTL8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.1021 non-coding 
CPAT coding probability 16.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACTL8-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARHGEF10L-1:2
3.1 lnc-ACTL8-1:2
4.0 lnc-ACTL8-1:2
4.1 lnc-ACTL8-1:2
5.0 lnc-ACTL8-1:2
5.1 lnc-SZRD1-66:3
5.2 lnc-ACTL8-1:2