Transcript: lnc-ACTR3C-2:2

Basic information

LNCipedia transcript ID: lnc-ACTR3C-2:2 
LNCipedia gene ID: lnc-ACTR3C-2
Location (hg38): chr7:150206304-150220478
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 277 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014003; NONHSAT124095
Alternative gene names: XLOC_006644; linc-ZNF467-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 62.7981 coding 
CPAT coding probability 2.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ACTR3C-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACTR3C-2:2
3.1 lnc-ACTR3C-2:2
4.0 lnc-ACTR3C-2:2
4.1 lnc-ACTR3C-2:2
5.0 lnc-ACTR3C-2:2
5.1 lnc-KMT2C-54:3
5.2 lnc-ACTR3C-2:2