Transcript: lnc-ACTRT3-8:1

Basic information

LNCipedia transcript ID: lnc-ACTRT3-8:1 
LNCipedia gene ID: lnc-ACTRT3-8
Location (hg38): chr3:169772318-169773343
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1026 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066791.1|FTMT21000008175.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -107.4376 non-coding 
CPAT coding probability 3.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ACTRT3-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC078802.1-8:1
5.0 lnc-AC078802.1-8:1
5.1 lnc-TBL1XR1-8:3
5.2 lnc-ACTRT3-8:1