Transcript: lnc-ADAM18-1:1

Basic information

LNCipedia transcript ID: lnc-ADAM18-1:1 
LNCipedia gene ID: lnc-ADAM18-1
Location (hg38): chr8:39566705-39580134
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 506 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000519537; ENST00000519537.1; CTD-2024D23.1-001; OTTHUMT00000376913.1; NONHSAT126176; ENST00000519537.5
Alternative gene names: ENSG00000254082; CTD-2024D23.1; ENSG00000254082.1; OTTHUMG00000164039.1; ENSG00000254082.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -291.6832 non-coding 
CPAT coding probability 5.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAM18-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADAM18-1:1
3.1 lnc-ADAM18-1:1
4.0 lnc-ADAM18-1:1
4.1 lnc-ADAM18-1:1
5.0 lnc-ADAM18-1:1
5.1 lnc-KCNU1-58:2
5.2 lnc-ADAM18-1:1