Transcript: lnc-ADAM18-1:3

Basic information

LNCipedia transcript ID: lnc-ADAM18-1:3 
LNCipedia gene ID: lnc-ADAM18-1
RefSeq ID: NR_046245
Location (hg38): chr8:39563112-39580134
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 520 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT126174; NR_046245; NR_046245.1
Alternative gene names: LOC100130964


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -291.6832 non-coding 
CPAT coding probability 5.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAM18-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAM18-1:3
4.0 lnc-ADAM18-1:3
4.1 lnc-ADAM18-1:3
5.0 lnc-ADAM18-1:3
5.1 lnc-KCNU1-58:1
5.2 lnc-ADAM18-1:3