Transcript: lnc-ADAM20-1:3

Basic information

LNCipedia transcript ID: lnc-ADAM20-1:3 
LNCipedia gene ID: lnc-ADAM20-1
Location (hg38): chr14:70425946-70453523
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 262 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023123; NONHSAT037564
Alternative gene names: XLOC_011061; linc-SYNJ2BP


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.9109 non-coding 
CPAT coding probability 4.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAM20-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SYNJ2BP-1:3
3.1 lnc-ADAM20-1:3
4.0 lnc-ADAM20-1:3
4.1 lnc-ADAM20-1:3
5.0 lnc-ADAM20-1:3
5.1 lnc-ABCD4-58:3
5.2 lnc-ADAM20-1:3