Transcript: lnc-ADAM29-5:2

Basic information

LNCipedia transcript ID: lnc-ADAM29-5:2 
LNCipedia gene ID: lnc-ADAM29-5
Location (hg38): chr4:174829668-174870787
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2270 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007413; NONHSAT099326
Alternative gene names: XLOC_003789; linc-ADAM29-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.0557 non-coding 
CPAT coding probability 4.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAM29-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CEP44-5:1
3.1 lnc-CEP44-5:1
4.0 lnc-ADAM29-5:2
4.1 lnc-ADAM29-5:2
5.0 lnc-ADAM29-5:2
5.1 lnc-GALNTL6-29:1
5.2 lnc-ADAM29-5:2