Transcript: lnc-ADAMTS15-1:13

Basic information

LNCipedia transcript ID: lnc-ADAMTS15-1:13 
LNCipedia gene ID: lnc-ADAMTS15-1
Ensembl Gene ID: ENSG00000175773
Ensembl Transcript ID: ENST00000602310
Location (hg38): chr11:130315039-130315683
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 330 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT025127; ENST00000602310.1
Alternative gene names: ENSG00000175773.8; RP11-121M22.1; ENSG00000175773.12; AP002986.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -294.6544 non-coding 
CPAT coding probability 5.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAMTS15-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-121M22.1.1-1:6
4.0 lnc-RP11-121M22.1.1-1:6
4.1 lnc-RP11-121M22.1.1-1:6
5.0 lnc-RP11-121M22.1.1-1:6
5.1 lnc-JAM3-29:12
5.2 lnc-ADAMTS15-1:13