Transcript: lnc-ADAMTS15-1:24

Basic information

LNCipedia transcript ID: lnc-ADAMTS15-1:24 
LNCipedia gene ID: lnc-ADAMTS15-1
Ensembl Gene ID: ENSG00000175773
Ensembl Transcript ID: ENST00000616197
Location (hg38): chr11:130401902-130403657
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 413 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616197.1
Alternative gene names: ENSG00000175773.12; RP11-121M22.1; AP002986.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -211.868 non-coding 
CPAT coding probability 7.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAMTS15-1:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-121M22.1.1-1:11
4.1 lnc-RP11-121M22.1.1-1:11
5.0 lnc-RP11-121M22.1.1-1:11
5.1 lnc-JAM3-29:23
5.2 lnc-ADAMTS15-1:24