Transcript: lnc-ADAMTS15-5:7

Basic information

LNCipedia transcript ID: lnc-ADAMTS15-5:7 
LNCipedia gene ID: lnc-ADAMTS15-5
Ensembl Gene ID: ENSG00000175728
Ensembl Transcript ID: ENST00000317019
Location (hg38): chr11:130672956-130717352
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3547 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000317019.2
Alternative gene names: ENSG00000175728.4; C11orf44


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -76.2663 non-coding 
CPAT coding probability 26.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAMTS15-5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C11orf44-16:1
4.1 lnc-C11orf44-1:9
5.0 lnc-C11orf44-1:9
5.1 lnc-JAM3-26:7
5.2 lnc-ADAMTS15-5:7