Transcript: lnc-ADAMTS5-2:1

Basic information

LNCipedia transcript ID: lnc-ADAMTS5-2:1 
LNCipedia gene ID: lnc-ADAMTS5-2
Location (hg38): chr21:27143344-27143949
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 606 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT081563
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 65.9969 coding 
CPAT coding probability 38.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ADAMTS5-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAMTS5-2:1
4.0 lnc-ADAMTS5-2:1
4.1 lnc-ADAMTS5-2:1
5.0 lnc-ADAMTS5-2:1
5.1 lnc-N6AMT1-2:4
5.2 lnc-ADAMTS5-2:1