Transcript: lnc-ADGRD2-1:1

Basic information

LNCipedia transcript ID: lnc-ADGRD2-1:1 
LNCipedia gene ID: lnc-ADGRD2-1
Location (hg38): chr9:124514938-124516056
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 266 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00015749; ENST00000369027.3; RP11-10J18.3-001; OTTHUMT00000054028.1; NONHSAT134693
Alternative gene names: XLOC_007559; linc-OLFML2A; ENSG00000231149.1; RP11-10J18.3; OTTHUMG00000020654.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -322.0454 non-coding 
CPAT coding probability 5.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADGRD2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR144-1:1
3.1 lnc-GPR144-1:1
4.0 lnc-GPR144-1:1
4.1 lnc-GPR144-1:1
5.0 lnc-GPR144-1:1
5.1 lnc-DAB2IP-44:1
5.2 lnc-ADGRD2-1:1