Transcript: lnc-ADGRD2-2:1

Basic information

LNCipedia transcript ID: lnc-ADGRD2-2:1 
LNCipedia gene ID: lnc-ADGRD2-2
Location (hg38): chr9:124340929-124341513
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 539 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000451007.1; RP11-101K10.8-001; OTTHUMT00000054027.1; NONHSAT134679
Alternative gene names: ENSG00000234236.1; RP11-101K10.8; OTTHUMG00000020653.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.0909 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADGRD2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR144-2:1
4.0 lnc-GPR144-2:1
4.1 lnc-GPR144-2:1
5.0 lnc-GPR144-2:1
5.1 lnc-DAB2IP-42:1
5.2 lnc-ADGRD2-2:1