Transcript: lnc-ADIRF-1:1

Basic information

LNCipedia transcript ID: lnc-ADIRF-1:1 
LNCipedia gene ID: lnc-ADIRF-1
Location (hg38): chr10:86970741-87008987
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1939 bp
Exons: 12
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000433214.1; AGAP11-001; OTTHUMT00000049192.2
Alternative gene names: ENSG00000151303.10; AGAP11; OTTHUMG00000018667.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.0969 non-coding 
CPAT coding probability 97.57% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ADIRF-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf116-1:2
4.0 lnc-FAM25A-1:3
4.1 lnc-FAM25A-1:3
5.0 lnc-FAM25A-1:3
5.1 lnc-SMC3-324:2
5.2 lnc-ADIRF-1:1