Transcript: lnc-ADPRM-5:6

Basic information

LNCipedia transcript ID: lnc-ADPRM-5:6 
LNCipedia gene ID: lnc-ADPRM-5
Location (hg38): chr17:10847463-10848370
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 626 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025308; NONHSAT145655
Alternative gene names: XLOC_012111; linc-SHISA6-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.4863 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADPRM-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C17orf48-1:1
3.1 lnc-C17orf48-4:1
4.0 lnc-C17orf48-4:1
4.1 lnc-C17orf48-5:9
5.0 lnc-C17orf48-5:9
5.1 lnc-GLP2R-163:6
5.2 lnc-ADPRM-5:6