Transcript: lnc-AEBP2-1:1

Basic information

LNCipedia transcript ID: lnc-AEBP2-1:1 
LNCipedia gene ID: lnc-AEBP2-1
Location (hg38): chr12:19306778-19528436
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2197 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000510738
Alternative gene names: ENSG00000248116


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.1401 non-coding 
CPAT coding probability 12.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AEBP2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AEBP2-1:1
3.1 lnc-AEBP2-1:1
4.0 lnc-AEBP2-1:1
4.1 lnc-AEBP2-1:1
5.0 lnc-AEBP2-1:1
5.1 lnc-BCL2L14-100:1
5.2 lnc-AEBP2-1:1