Transcript: lnc-AEBP2-2:1

Basic information

LNCipedia transcript ID: lnc-AEBP2-2:1 
LNCipedia gene ID: lnc-AEBP2-2
Location (hg38): chr12:19258271-19259943
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 678 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000541575.1; RP11-684O24.1-001; OTTHUMT00000401572.1; NONHSAT027197
Alternative gene names: ENSG00000257006.1; RP11-684O24.1; OTTHUMG00000168905.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.6878 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AEBP2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AEBP2-2:1
4.0 lnc-AEBP2-2:1
4.1 lnc-AEBP2-2:1
5.0 lnc-AEBP2-2:1
5.1 lnc-BCL2L14-95:1
5.2 lnc-AEBP2-2:1