Transcript: lnc-AFG3L2-6:6

Basic information

LNCipedia transcript ID: lnc-AFG3L2-6:6 
LNCipedia gene ID: lnc-AFG3L2-6
Location (hg38): chr18:11905826-11908315
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 599 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT058330
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.0229 non-coding 
CPAT coding probability 1.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AFG3L2-6:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP002414.1.1-5:7
4.0 lnc-AP002414.1.1-5:7
4.1 lnc-AP002414.1.1-5:7
5.0 lnc-AP002414.1.1-5:7
5.1 lnc-SMAD2-273:6
5.2 lnc-AFG3L2-6:6