Transcript: lnc-AFG3L2-7:1

Basic information

LNCipedia transcript ID: lnc-AFG3L2-7:1 
LNCipedia gene ID: lnc-AFG3L2-7
Location (hg38): chr18:11884166-11885121
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 705 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT058323
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -140.8168 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AFG3L2-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP002414.1.1-5:11
4.0 lnc-AP002414.1.1-6:1
4.1 lnc-AP002414.1.1-6:1
5.0 lnc-AP002414.1.1-6:1
5.1 lnc-SMAD2-274:1
5.2 lnc-AFG3L2-7:1