Transcript: lnc-AGAP1-8:1

Basic information

LNCipedia transcript ID: lnc-AGAP1-8:1 
LNCipedia gene ID: lnc-AGAP1-8
Location (hg38): chr2:236569825-236571618
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1794 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT077609
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.5473 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGAP1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC079135.1.1-8:1
4.0 lnc-AC079135.1.1-8:1
4.1 lnc-AC079135.1.1-8:1
5.0 lnc-AC079135.1.1-8:1
5.1 lnc-COPS8-15:1
5.2 lnc-AGAP1-8:1