Transcript: lnc-AGAP2-3:1

Basic information

LNCipedia transcript ID: lnc-AGAP2-3:1 
LNCipedia gene ID: lnc-AGAP2-3
Location (hg38): chr12:57749191-57752333
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 636 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT028962
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 1110.6286 coding 
CPAT coding probability 68.96% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AGAP2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AGAP2-3:1
4.0 lnc-AGAP2-3:1
4.1 lnc-AGAP2-3:1
5.0 lnc-AGAP2-3:1
5.1 lnc-PMEL-69:1
5.2 lnc-AGAP2-3:1