Transcript: lnc-AGAP5-1:15

Basic information

LNCipedia transcript ID: lnc-AGAP5-1:15 
LNCipedia gene ID: lnc-AGAP5-1
Location (hg38): chr10:73742952-73744311
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 374 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242288.6|FTMT23700005242.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.9258 non-coding 
CPAT coding probability 3.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGAP5-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AGAP5-1:15
5.0 lnc-AGAP5-1:15
5.1 lnc-VSIR-31:3
5.2 lnc-AGAP5-1:15